Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AC013726.1-201ENST00000563747 2285 ntBASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 PTENP1-202ENST00000532280 3996 ntBASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AL133267.1-201ENST00000398220 340 ntBASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AC114501.2-201ENST00000439631 535 ntBASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 KRT18P43-201ENST00000469825 1281 ntBASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 TIMM17BP1-201ENST00000545713 516 ntBASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AC015910.1-201ENST00000579400 975 ntBASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 LINC01115-203ENST00000606068 577 ntBASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB4X5D2U9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 AC022144.1-201ENST00000602255 1580 ntBASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 TOMM22P5-201ENST00000416399 439 ntBASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 CYMP-203ENST00000474680 1263 ntBASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 AC004890.2-204ENST00000481968 304 ntBASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 AC093214.1-201ENST00000511688 1107 ntBASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms