Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 IGLL3P-201ENST00000412472 434 ntBASIC14.54□□□□□ -0.08
AP4S1Q9Y587 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 VN2R19P-201ENST00000442399 1052 ntBASIC14.54□□□□□ -0.08
AP4S1Q9Y587 AL139010.1-201ENST00000454878 894 ntBASIC14.54□□□□□ -0.08
AP4S1Q9Y587 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 AC012640.2-201ENST00000561606 901 ntBASIC14.54□□□□□ -0.08
AP4S1Q9Y587 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 AL161645.1-201ENST00000622716 1255 ntBASIC14.54□□□□□ -0.08
AP4S1Q9Y587 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 AC055811.4-201ENST00000624039 1754 ntBASIC14.54□□□□□ -0.08
AP4S1Q9Y587 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 DGCR9-201ENST00000609630 2415 ntBASIC14.53□□□□□ -0.08
AP4S1Q9Y587 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 AC023090.2-201ENST00000625182 2110 ntBASIC14.53□□□□□ -0.08
AP4S1Q9Y587 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 AC012508.2-201ENST00000567613 1472 ntBASIC14.53□□□□□ -0.08
AP4S1Q9Y587 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 AL138918.1-201ENST00000568306 659 ntBASIC14.53□□□□□ -0.08
AP4S1Q9Y587 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP4S1Q9Y587 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 FOXO1B-201ENST00000504678 1527 ntBASIC14.52□□□□□ -0.08
AP4S1Q9Y587 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 AL731571.1-201ENST00000617058 5428 ntBASIC14.52□□□□□ -0.08
AP4S1Q9Y587 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP4S1Q9Y587 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 RHOQP3-201ENST00000437982 621 ntBASIC14.52□□□□□ -0.09
AP4S1Q9Y587 TPT1P11-201ENST00000458482 498 ntBASIC14.52□□□□□ -0.09
AP4S1Q9Y587 AC108751.1-201ENST00000490852 363 ntBASIC14.52□□□□□ -0.09
AP4S1Q9Y587 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 AC096734.2-201ENST00000562054 433 ntBASIC14.52□□□□□ -0.09
AP4S1Q9Y587 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 AC117500.6-201ENST00000624871 588 ntBASIC14.52□□□□□ -0.09
AP4S1Q9Y587 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP4S1Q9Y587 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms