Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 AC136604.1-201ENST00000418535 575 ntBASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 AC096734.2-201ENST00000562054 433 ntBASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 TP73-AS1-207ENST00000624167 988 ntBASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RCL1Q9Y2P8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
RCL1Q9Y2P8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
RCL1Q9Y2P8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.58□□□□□ -0.39
RCL1Q9Y2P8 AC011474.4-201ENST00000623523 2076 ntBASIC12.58□□□□□ -0.39
RCL1Q9Y2P8 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
RCL1Q9Y2P8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
RCL1Q9Y2P8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 MST1P2-201ENST00000457982 2291 ntBASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 DGCR9-201ENST00000609630 2415 ntBASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 HCG4B-203ENST00000450128 991 ntBASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 RNA5SP410-201ENST00000516285 106 ntBASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 AL138918.1-201ENST00000568306 659 ntBASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 LINC01711-201ENST00000598340 967 ntBASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 AC099521.3-201ENST00000624251 2938 ntBASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RCL1Q9Y2P8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms