Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 AL358472.3-201ENST00000608147 415 ntBASIC20.71■□□□□ 0.91
NINLQ9Y2I6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 UPF3AP2-201ENST00000457924 1132 ntBASIC20.7■□□□□ 0.9
NINLQ9Y2I6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NINLQ9Y2I6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NINLQ9Y2I6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 AC126915.1-201ENST00000522847 1038 ntBASIC20.68■□□□□ 0.9
NINLQ9Y2I6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 MIR5572-201ENST00000583188 137 ntBASIC20.68■□□□□ 0.9
NINLQ9Y2I6 AC002472.3-201ENST00000640124 621 ntBASIC20.68■□□□□ 0.9
NINLQ9Y2I6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 OR6D1P-203ENST00000641209 4860 ntBASIC20.68■□□□□ 0.9
NINLQ9Y2I6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 AC136621.1-201ENST00000624017 2304 ntBASIC20.68■□□□□ 0.9
NINLQ9Y2I6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NINLQ9Y2I6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NINLQ9Y2I6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms