Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 REXO1L2P-201ENST00000425429 2069 ntBASIC12.7□□□□□ -0.38
CALYQ9NYX4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 MIR770-201ENST00000390219 98 ntBASIC12.7□□□□□ -0.38
CALYQ9NYX4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 RN7SL399P-201ENST00000471648 279 ntBASIC12.7□□□□□ -0.38
CALYQ9NYX4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 AC093004.1-201ENST00000508850 424 ntBASIC12.7□□□□□ -0.38
CALYQ9NYX4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 RRP7BP-205ENST00000566851 833 ntBASIC12.7□□□□□ -0.38
CALYQ9NYX4 AC027796.2-201ENST00000575326 344 ntBASIC12.7□□□□□ -0.38
CALYQ9NYX4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 AL049840.4-201ENST00000602422 811 ntBASIC12.7□□□□□ -0.38
CALYQ9NYX4 AC009118.2-201ENST00000613275 655 ntBASIC12.7□□□□□ -0.38
CALYQ9NYX4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 ACE3P-201ENST00000423435 1973 ntBASIC12.7□□□□□ -0.38
CALYQ9NYX4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CALYQ9NYX4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CALYQ9NYX4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 AC013726.1-201ENST00000563747 2285 ntBASIC12.69□□□□□ -0.38
CALYQ9NYX4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 AJ011931.1-201ENST00000618749 2492 ntBASIC12.69□□□□□ -0.38
CALYQ9NYX4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 GNAQP1-201ENST00000444815 1067 ntBASIC12.69□□□□□ -0.38
CALYQ9NYX4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 RPL13AP25-201ENST00000484130 612 ntBASIC12.69□□□□□ -0.38
CALYQ9NYX4 GAPDHP40-201ENST00000505218 1006 ntBASIC12.69□□□□□ -0.38
CALYQ9NYX4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 AC055876.2-201ENST00000531834 546 ntBASIC12.69□□□□□ -0.38
CALYQ9NYX4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CALYQ9NYX4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CALYQ9NYX4 AC107373.2-201ENST00000607735 490 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms