Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 AC027307.2-201ENST00000591252 911 ntBASIC14.05□□□□□ -0.16
CLN6Q9NWW5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 AC092135.3-201ENST00000624151 1846 ntBASIC14.05□□□□□ -0.16
CLN6Q9NWW5 HLA-A-201ENST00000376802 1334 ntBASIC14.05□□□□□ -0.16
CLN6Q9NWW5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN6Q9NWW5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 AC018442.1-201ENST00000421439 2061 ntBASIC14.04□□□□□ -0.16
CLN6Q9NWW5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 AC142381.1-201ENST00000426099 345 ntBASIC14.04□□□□□ -0.16
CLN6Q9NWW5 AC007967.2-201ENST00000432613 625 ntBASIC14.04□□□□□ -0.16
CLN6Q9NWW5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.04□□□□□ -0.16
CLN6Q9NWW5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLN6Q9NWW5 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 AZGP1P1-201ENST00000411909 902 ntBASIC14.03□□□□□ -0.16
CLN6Q9NWW5 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.03□□□□□ -0.16
CLN6Q9NWW5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 AL135744.1-201ENST00000565098 629 ntBASIC14.03□□□□□ -0.16
CLN6Q9NWW5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.03□□□□□ -0.16
CLN6Q9NWW5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms