Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 AC087163.2-201ENST00000457299 853 ntBASIC18.3■□□□□ 0.52
RTN4Q9NQC3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 AL139424.3-202ENST00000641619 917 ntBASIC18.3■□□□□ 0.52
RTN4Q9NQC3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 AL049829.3-201ENST00000604456 1875 ntBASIC18.3■□□□□ 0.52
RTN4Q9NQC3 AC011474.4-201ENST00000623523 2076 ntBASIC18.3■□□□□ 0.52
RTN4Q9NQC3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 TSN-202ENST00000409193 1436 ntTSL 5 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN4Q9NQC3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 RBM17P3-201ENST00000417687 1192 ntBASIC18.29■□□□□ 0.52
RTN4Q9NQC3 TPTE2P1-204ENST00000435256 593 ntBASIC18.29■□□□□ 0.52
RTN4Q9NQC3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.29■□□□□ 0.52
RTN4Q9NQC3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 AL358472.4-201ENST00000633140 710 ntBASIC18.29■□□□□ 0.52
RTN4Q9NQC3 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN4Q9NQC3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 WFDC5-201ENST00000307971 1034 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 AL133445.2-201ENST00000611191 527 ntBASIC18.28■□□□□ 0.52
RTN4Q9NQC3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms