Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 AC087499.5-201ENST00000452760 1342 ntBASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 AC107890.1-201ENST00000422478 521 ntBASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 AC140878.1-201ENST00000565277 250 ntBASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 INTS4P1-203ENST00000641008 3683 ntBASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
LRTM1Q9HBL6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 AC000095.1-201ENST00000603208 874 ntBASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 SBF1P1-201ENST00000444527 5631 ntBASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRTM1Q9HBL6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms