Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 AL590560.3-201ENST00000623350 461 ntBASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 AC138969.3-201ENST00000546612 1459 ntBASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 AC138932.2-201ENST00000548268 1459 ntBASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 AC126755.4-201ENST00000549796 1459 ntBASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 CICP11-201ENST00000434745 2827 ntBASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC68Q9H2F9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 ST20-AS1-201ENST00000560255 4223 ntBASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 CICP4-201ENST00000447359 2812 ntBASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 TOMM22P5-201ENST00000416399 439 ntBASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 ZNF890P-202ENST00000530367 1156 ntBASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 AL390754.1-201ENST00000619088 582 ntBASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 WASH3P-207ENST00000560956 1394 ntBASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 AL121723.1-201ENST00000445194 1519 ntBASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC68Q9H2F9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 AGAP7P-201ENST00000582299 2062 ntBASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 AGAP14-201ENST00000624701 2060 ntBASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC68Q9H2F9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms