Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
POLR2J2Q9GZM3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR2J2Q9GZM3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR2J2Q9GZM3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
POLR2J2Q9GZM3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.23□□□□□ -0.13
POLR2J2Q9GZM3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.23□□□□□ -0.13
POLR2J2Q9GZM3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
POLR2J2Q9GZM3 REXO1L2P-201ENST00000425429 2069 ntBASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 AC005840.4-201ENST00000541242 2494 ntBASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 TOMM22P5-201ENST00000416399 439 ntBASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 KRT18P43-201ENST00000469825 1281 ntBASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 HLA-V-204ENST00000476601 1289 ntBASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.22□□□□□ -0.13
POLR2J2Q9GZM3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 RPSAP43-201ENST00000402237 625 ntBASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 AC211486.1-202ENST00000416371 468 ntBASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 UPF3AP3-201ENST00000420996 769 ntBASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 BX842568.4-201ENST00000421222 227 ntBASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 RPL13P2-201ENST00000440687 659 ntBASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 AC112482.1-201ENST00000492080 688 ntBASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 AC211476.1-201ENST00000503899 468 ntBASIC14.21□□□□□ -0.13
POLR2J2Q9GZM3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms