Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 XBP1P1-201ENST00000436573 652 ntBASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 AL035414.1-201ENST00000451327 857 ntBASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 MIR3188-201ENST00000583494 85 ntBASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP4Q9C0A0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 KRT18P36-201ENST00000411618 1276 ntBASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 AP000358.1-201ENST00000456260 156 ntBASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 MIR6756-201ENST00000616240 63 ntBASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 AC079328.2-201ENST00000561241 3354 ntBASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 AC090616.6-203ENST00000579186 1945 ntBASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 OR6D1P-202ENST00000641007 5290 ntBASIC18.87■□□□□ 0.61
CNTNAP4Q9C0A0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 AL592076.1-201ENST00000424448 303 ntBASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 AC009084.3-201ENST00000623356 437 ntBASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP4Q9C0A0 AC015909.3-201ENST00000572855 1794 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms