Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 LINC00528-201ENST00000600723 2160 ntBASIC14.15□□□□□ -0.14
TRIM2Q9C040 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 AC236430.1-201ENST00000402231 743 ntBASIC14.15□□□□□ -0.14
TRIM2Q9C040 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 AC241585.1-201ENST00000433527 519 ntBASIC14.15□□□□□ -0.14
TRIM2Q9C040 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 AC044860.1-202ENST00000559481 777 ntBASIC14.15□□□□□ -0.14
TRIM2Q9C040 RN7SL204P-201ENST00000582831 262 ntBASIC14.15□□□□□ -0.14
TRIM2Q9C040 AL844908.2-201ENST00000609461 460 ntBASIC14.15□□□□□ -0.14
TRIM2Q9C040 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.15□□□□□ -0.14
TRIM2Q9C040 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 AC100757.3-201ENST00000622361 1406 ntBASIC14.15□□□□□ -0.14
TRIM2Q9C040 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRIM2Q9C040 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRIM2Q9C040 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.14□□□□□ -0.15
TRIM2Q9C040 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 AC104457.1-201ENST00000401024 814 ntBASIC14.14□□□□□ -0.15
TRIM2Q9C040 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 AC002472.2-201ENST00000442739 958 ntBASIC14.14□□□□□ -0.15
TRIM2Q9C040 FAM207CP-201ENST00000443486 507 ntBASIC14.14□□□□□ -0.15
TRIM2Q9C040 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 TERF1P3-201ENST00000505638 1227 ntBASIC14.14□□□□□ -0.15
TRIM2Q9C040 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 AC000095.1-201ENST00000603208 874 ntBASIC14.14□□□□□ -0.15
TRIM2Q9C040 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 AL590560.3-201ENST00000623350 461 ntBASIC14.14□□□□□ -0.15
TRIM2Q9C040 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 FAM45BP-202ENST00000592932 1624 ntBASIC14.14□□□□□ -0.15
TRIM2Q9C040 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.14□□□□□ -0.15
TRIM2Q9C040 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM2Q9C040 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRIM2Q9C040 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM2Q9C040 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM2Q9C040 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM2Q9C040 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM2Q9C040 BTBD7P1-201ENST00000447253 1453 ntBASIC14.13□□□□□ -0.15
TRIM2Q9C040 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRIM2Q9C040 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms