Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 AC015910.1-201ENST00000579400 975 ntBASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 AC027307.3-201ENST00000594262 1100 ntBASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 AC007326.2-201ENST00000624224 7579 ntBASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXP3Q9BZS1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 BX640514.1-201ENST00000583223 1918 ntBASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 HLA-V-204ENST00000476601 1289 ntBASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 AC025048.6-201ENST00000634326 1161 ntBASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXP3Q9BZS1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXP3Q9BZS1 AC097376.2-205ENST00000610159 5334 ntBASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 TARDBPP1-201ENST00000442013 1203 ntBASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms