Protein–RNA interactions for Protein: Q9BUF7

CRB3, Protein crumbs homolog 3, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3Q9BUF7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 RNU1-114P-201ENST00000365297 166 ntBASIC14.41□□□□□ -0.1
CRB3Q9BUF7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 KLF2P2-201ENST00000416807 1039 ntBASIC14.41□□□□□ -0.1
CRB3Q9BUF7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 AP000812.2-201ENST00000538934 718 ntBASIC14.41□□□□□ -0.1
CRB3Q9BUF7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 AC145423.3-201ENST00000615987 467 ntBASIC14.41□□□□□ -0.1
CRB3Q9BUF7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 AC009090.5-201ENST00000624886 2285 ntBASIC14.41□□□□□ -0.1
CRB3Q9BUF7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRB3Q9BUF7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 AC099336.1-201ENST00000417053 1171 ntBASIC14.4□□□□□ -0.1
CRB3Q9BUF7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 HLA-V-201ENST00000429037 534 ntBASIC14.4□□□□□ -0.1
CRB3Q9BUF7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 AC114812.1-204ENST00000449669 728 ntBASIC14.4□□□□□ -0.1
CRB3Q9BUF7 FO681548.1-201ENST00000455617 1132 ntBASIC14.4□□□□□ -0.1
CRB3Q9BUF7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 AC079316.1-201ENST00000548397 411 ntBASIC14.4□□□□□ -0.1
CRB3Q9BUF7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 AC025279.2-201ENST00000569730 653 ntBASIC14.4□□□□□ -0.1
CRB3Q9BUF7 GNRHR2-203ENST00000581100 1187 ntBASIC14.4□□□□□ -0.1
CRB3Q9BUF7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CRB3Q9BUF7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CRB3Q9BUF7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CRB3Q9BUF7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CRB3Q9BUF7 AC007787.1-201ENST00000588095 1583 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms