Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AL035456.1-201ENST00000456064 1369 ntBASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AC041040.2-201ENST00000622926 2899 ntBASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AC027601.5-201ENST00000624065 2482 ntBASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AC025181.2-201ENST00000606994 802 ntBASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 AL589739.1-201ENST00000607720 493 ntBASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 LINC00628-201ENST00000628516 1289 ntBASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDHD3Q9BSH5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms