Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 AC003102.2-201ENST00000589195 1469 ntBASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 RN7SL258P-201ENST00000478664 300 ntBASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 BX088702.1-201ENST00000610784 235 ntBASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 COX6A1P2-201ENST00000620597 330 ntBASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CRAMP1Q96RY5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 AC136759.1-202ENST00000530858 2194 ntBASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 RN7SL181P-201ENST00000462921 277 ntBASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 AC090616.6-203ENST00000579186 1945 ntBASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 AL139384.1-201ENST00000612143 3047 ntBASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CRAMP1Q96RY5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 KRT8P21-201ENST00000430398 1491 ntBASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 NPM1P43-201ENST00000558669 786 ntBASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 AC051619.9-201ENST00000623237 597 ntBASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 AP005117.1-202ENST00000581724 1908 ntBASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CRAMP1Q96RY5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms