Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AP006294.1-201ENST00000415407 339 ntBASIC15.86■□□□□ 0.13
IFT43Q96FT9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AC011495.1-201ENST00000498085 584 ntBASIC15.86■□□□□ 0.13
IFT43Q96FT9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AC092337.1-201ENST00000568699 1129 ntBASIC15.86■□□□□ 0.13
IFT43Q96FT9 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AC004461.2-201ENST00000629517 803 ntBASIC15.86■□□□□ 0.13
IFT43Q96FT9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AC139749.1-202ENST00000617529 3139 ntBASIC15.86■□□□□ 0.13
IFT43Q96FT9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
IFT43Q96FT9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT43Q96FT9 AP002414.2-201ENST00000591780 3365 ntBASIC15.86■□□□□ 0.13
IFT43Q96FT9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 LINC00528-201ENST00000600723 2160 ntBASIC15.85■□□□□ 0.13
IFT43Q96FT9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 KRT18P64-201ENST00000434946 1219 ntBASIC15.85■□□□□ 0.13
IFT43Q96FT9 RPL13P2-201ENST00000440687 659 ntBASIC15.85■□□□□ 0.13
IFT43Q96FT9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 RRP7BP-205ENST00000566851 833 ntBASIC15.85■□□□□ 0.13
IFT43Q96FT9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 AL359881.2-201ENST00000602973 570 ntBASIC15.85■□□□□ 0.13
IFT43Q96FT9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 AC097376.2-205ENST00000610159 5334 ntBASIC15.85■□□□□ 0.13
IFT43Q96FT9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT43Q96FT9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT43Q96FT9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms