Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 SPDYE7P-202ENST00000420373 878 ntBASIC13.4□□□□□ -0.26
CPNE2Q96FN4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 AP000344.2-201ENST00000512987 629 ntBASIC13.4□□□□□ -0.26
CPNE2Q96FN4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 AC022145.2-201ENST00000598203 171 ntBASIC13.4□□□□□ -0.26
CPNE2Q96FN4 AC003101.2-201ENST00000612557 442 ntBASIC13.4□□□□□ -0.26
CPNE2Q96FN4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 AC105339.1-204ENST00000636249 355 ntBASIC13.4□□□□□ -0.26
CPNE2Q96FN4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.4□□□□□ -0.26
CPNE2Q96FN4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CPNE2Q96FN4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.4□□□□□ -0.27
CPNE2Q96FN4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.4□□□□□ -0.27
CPNE2Q96FN4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CPNE2Q96FN4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CPNE2Q96FN4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.4□□□□□ -0.27
CPNE2Q96FN4 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CPNE2Q96FN4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CPNE2Q96FN4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 GHSR-202ENST00000427970 912 ntBASIC13.39□□□□□ -0.27
CPNE2Q96FN4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 SLED1-202ENST00000512051 380 ntBASIC13.39□□□□□ -0.27
CPNE2Q96FN4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 KRT8P12-202ENST00000472924 1397 ntBASIC13.39□□□□□ -0.27
CPNE2Q96FN4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CPNE2Q96FN4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms