Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 AL512638.1-201ENST00000457493 794 ntBASIC16.22■□□□□ 0.19
TRIM11Q96F44 AC004890.2-204ENST00000481968 304 ntBASIC16.22■□□□□ 0.19
TRIM11Q96F44 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 RARRES2P5-201ENST00000564013 466 ntBASIC16.22■□□□□ 0.19
TRIM11Q96F44 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 AC008738.7-201ENST00000609744 511 ntBASIC16.22■□□□□ 0.19
TRIM11Q96F44 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 AL360270.3-201ENST00000609118 1348 ntBASIC16.21■□□□□ 0.19
TRIM11Q96F44 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 AL645937.2-201ENST00000396808 931 ntBASIC16.21■□□□□ 0.19
TRIM11Q96F44 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 RPL13AP25-201ENST00000484130 612 ntBASIC16.21■□□□□ 0.19
TRIM11Q96F44 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 AC004840.1-201ENST00000636359 365 ntBASIC16.21■□□□□ 0.19
TRIM11Q96F44 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 CICP14-201ENST00000629111 2732 ntBASIC16.21■□□□□ 0.19
TRIM11Q96F44 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM11Q96F44 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM11Q96F44 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
TRIM11Q96F44 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
TRIM11Q96F44 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TRIM11Q96F44 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TRIM11Q96F44 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM11Q96F44 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM11Q96F44 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 MEP1AP4-201ENST00000423244 1087 ntBASIC16.2■□□□□ 0.18
TRIM11Q96F44 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 BASP1P1-201ENST00000430708 665 ntBASIC16.2■□□□□ 0.18
TRIM11Q96F44 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM11Q96F44 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM11Q96F44 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms