Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.55□□□□□ -0.24
AP3S1Q92572 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
AP3S1Q92572 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.55□□□□□ -0.24
AP3S1Q92572 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
AP3S1Q92572 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
AP3S1Q92572 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
AP3S1Q92572 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
AP3S1Q92572 AC098859.1-201ENST00000502915 1238 ntBASIC13.54□□□□□ -0.24
AP3S1Q92572 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.54□□□□□ -0.24
AP3S1Q92572 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.54□□□□□ -0.24
AP3S1Q92572 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S1Q92572 OR7E47P-204ENST00000575924 449 ntBASIC13.54□□□□□ -0.24
AP3S1Q92572 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
AP3S1Q92572 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 AL122018.1-201ENST00000446607 2310 ntBASIC13.54□□□□□ -0.24
AP3S1Q92572 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 AC099521.3-201ENST00000624251 2938 ntBASIC13.54□□□□□ -0.24
AP3S1Q92572 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
AP3S1Q92572 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S1Q92572 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S1Q92572 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S1Q92572 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S1Q92572 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
AP3S1Q92572 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S1Q92572 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S1Q92572 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S1Q92572 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
AP3S1Q92572 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
AP3S1Q92572 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.53□□□□□ -0.24
AP3S1Q92572 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
AP3S1Q92572 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
AP3S1Q92572 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.53□□□□□ -0.24
AP3S1Q92572 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.53□□□□□ -0.24
AP3S1Q92572 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 AL031133.1-201ENST00000406807 723 ntBASIC13.53□□□□□ -0.24
AP3S1Q92572 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.53□□□□□ -0.24
AP3S1Q92572 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.53□□□□□ -0.24
AP3S1Q92572 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
AP3S1Q92572 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 HNRNPUP1-201ENST00000554987 333 ntBASIC13.53□□□□□ -0.24
AP3S1Q92572 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.53□□□□□ -0.24
AP3S1Q92572 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S1Q92572 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.53□□□□□ -0.24
AP3S1Q92572 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S1Q92572 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
AP3S1Q92572 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms