Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ZNF877P-201ENST00000437614 612 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 CCND3P1-201ENST00000438347 580 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 JPT1-205ENST00000470924 663 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 KRT8P34-201ENST00000577607 1044 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC013467.2-201ENST00000605472 835 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC092611.3-201ENST00000624858 718 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 VTI1BP2-201ENST00000394154 696 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AL445070.1-201ENST00000414631 714 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC004466.1-201ENST00000599515 1080 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC245369.8-201ENST00000636589 306 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 RNF165-205ENST00000588679 2904 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC000077.1-201ENST00000420012 953 ntBASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 DANCR-205ENST00000623036 748 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE2Q8WXH0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 HNRNPA3P6-201ENST00000472163 1006 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms