Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 AC136759.1-202ENST00000530858 2194 ntBASIC13.34□□□□□ -0.27
CCDC107Q8WV48 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 AC131212.3-201ENST00000624087 4219 ntBASIC13.34□□□□□ -0.27
CCDC107Q8WV48 AL136982.4-201ENST00000437689 1740 ntBASIC13.34□□□□□ -0.27
CCDC107Q8WV48 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 MCCD1P2-201ENST00000423228 335 ntBASIC13.34□□□□□ -0.27
CCDC107Q8WV48 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.33□□□□□ -0.27
CCDC107Q8WV48 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCDC107Q8WV48 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CCDC107Q8WV48 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCDC107Q8WV48 WASH3P-207ENST00000560956 1394 ntBASIC13.33□□□□□ -0.27
CCDC107Q8WV48 FO538757.1-201ENST00000623083 1397 ntBASIC13.33□□□□□ -0.27
CCDC107Q8WV48 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.33□□□□□ -0.27
CCDC107Q8WV48 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCDC107Q8WV48 AL359881.3-201ENST00000602640 1721 ntBASIC13.33□□□□□ -0.27
CCDC107Q8WV48 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 HSPA7-201ENST00000445535 1927 ntBASIC13.33□□□□□ -0.28
CCDC107Q8WV48 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 ADH5P3-201ENST00000433842 1137 ntBASIC13.33□□□□□ -0.28
CCDC107Q8WV48 AL592309.1-201ENST00000443127 649 ntBASIC13.33□□□□□ -0.28
CCDC107Q8WV48 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 C20orf181-201ENST00000623918 480 ntBASIC13.33□□□□□ -0.28
CCDC107Q8WV48 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.33□□□□□ -0.28
CCDC107Q8WV48 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms