Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LSMEM1Q8N8F7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LSMEM1Q8N8F7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LSMEM1Q8N8F7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
LSMEM1Q8N8F7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LSMEM1Q8N8F7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LSMEM1Q8N8F7 REXO1L4P-201ENST00000605109 1937 ntBASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 METTL21AP1-201ENST00000438852 635 ntBASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 MEIS3P1-201ENST00000495167 958 ntBASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 DUX4L27-201ENST00000554796 1261 ntBASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 AL391069.4-201ENST00000609583 481 ntBASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
LSMEM1Q8N8F7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LSMEM1Q8N8F7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 NORAD-201ENST00000565493 5339 ntBASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 AC055876.3-201ENST00000431496 288 ntBASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 IGHV3-42-201ENST00000520410 361 ntBASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 AC138649.4-201ENST00000612222 287 ntBASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LSMEM1Q8N8F7 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms