Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ARHGEF39Q8N4T4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 AC023157.3-201ENST00000619086 2088 ntBASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 AC245100.3-201ENST00000441281 285 ntBASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 AC006453.4-201ENST00000636949 1252 ntBASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARHGEF39Q8N4T4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 ACE3P-201ENST00000423435 1973 ntBASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 CSF2RBP1-201ENST00000447905 391 ntBASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 AP003171.2-201ENST00000528208 925 ntBASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 ECM1P1-201ENST00000604092 1279 ntBASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 AC008687.7-202ENST00000637404 953 ntBASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms