Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AC142381.1-201ENST00000426099 345 ntBASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AC004832.2-201ENST00000426397 482 ntBASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AC092865.6-201ENST00000642101 219 ntBASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AC005840.4-201ENST00000541242 2494 ntBASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 AC027601.5-201ENST00000624065 2482 ntBASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM42Q8IWZ5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 YBX2P1-201ENST00000394192 760 ntBASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 AC074386.1-202ENST00000463561 864 ntBASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 AP000845.1-201ENST00000581677 2131 ntBASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 AL513190.1-201ENST00000621254 727 ntBASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 AC073869.1-201ENST00000415574 2762 ntBASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM42Q8IWZ5 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms