Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 AC136632.2-201ENST00000512891 861 ntBASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 AL049597.2-201ENST00000565575 961 ntBASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LYSMD2Q8IV50 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms