Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 CYP4F23P-201ENST00000593402 1579 ntBASIC10.39□□□□□ -0.75
CSMD3Q7Z407 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 FTLP5-201ENST00000586853 534 ntBASIC10.39□□□□□ -0.75
CSMD3Q7Z407 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 AD000864.1-201ENST00000624076 2295 ntBASIC10.39□□□□□ -0.75
CSMD3Q7Z407 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 RPL8P2-201ENST00000430538 502 ntBASIC10.39□□□□□ -0.75
CSMD3Q7Z407 PSMD4P1-201ENST00000433951 1109 ntBASIC10.39□□□□□ -0.75
CSMD3Q7Z407 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 AC006122.1-201ENST00000493323 440 ntBASIC10.39□□□□□ -0.75
CSMD3Q7Z407 CCNC-217ENST00000523985 958 ntTSL 2 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 AC002472.3-201ENST00000640124 621 ntBASIC10.38□□□□□ -0.75
CSMD3Q7Z407 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 HCG27-204ENST00000424675 895 ntTSL 3 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 TSPY25P-201ENST00000429463 745 ntBASIC10.38□□□□□ -0.75
CSMD3Q7Z407 AL512306.1-201ENST00000432698 848 ntBASIC10.38□□□□□ -0.75
CSMD3Q7Z407 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 TPM1-223ENST00000560445 485 ntTSL 3 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 THY1-209ENST00000580275 578 ntTSL 3 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CSMD3Q7Z407 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms