Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 AC010327.4-202ENST00000591484 748 ntBASIC15.48■□□□□ 0.07
RAPH1Q70E73 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAPH1Q70E73 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.48■□□□□ 0.07
RAPH1Q70E73 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AC015656.1-201ENST00000624209 3578 ntBASIC15.47■□□□□ 0.07
RAPH1Q70E73 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AC023141.5-201ENST00000458585 616 ntBASIC15.47■□□□□ 0.07
RAPH1Q70E73 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AL079307.3-201ENST00000556114 283 ntBASIC15.47■□□□□ 0.07
RAPH1Q70E73 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 AL589739.1-201ENST00000607720 493 ntBASIC15.47■□□□□ 0.07
RAPH1Q70E73 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 MIR6069-201ENST00000620069 79 ntBASIC15.47■□□□□ 0.07
RAPH1Q70E73 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
RAPH1Q70E73 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAPH1Q70E73 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms