Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 ALG1L5P-201ENST00000482043 771 ntBASIC13.49□□□□□ -0.25
C11orf88Q6PI97 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 AC112191.1-201ENST00000523689 701 ntBASIC13.49□□□□□ -0.25
C11orf88Q6PI97 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 AC068137.2-201ENST00000605408 478 ntBASIC13.49□□□□□ -0.25
C11orf88Q6PI97 AL596442.2-201ENST00000610240 980 ntBASIC13.49□□□□□ -0.25
C11orf88Q6PI97 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AC025580.3-201ENST00000617932 1424 ntBASIC13.48□□□□□ -0.25
C11orf88Q6PI97 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AC006504.5-208ENST00000588784 2401 ntBASIC13.48□□□□□ -0.25
C11orf88Q6PI97 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 FAM58CP-201ENST00000435741 640 ntBASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AC245100.5-201ENST00000452108 331 ntBASIC13.48□□□□□ -0.25
C11orf88Q6PI97 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AC107918.2-201ENST00000530817 355 ntBASIC13.48□□□□□ -0.25
C11orf88Q6PI97 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.48□□□□□ -0.25
C11orf88Q6PI97 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 AL645728.2-201ENST00000641974 660 ntBASIC13.48□□□□□ -0.25
C11orf88Q6PI97 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.48□□□□□ -0.25
C11orf88Q6PI97 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.48□□□□□ -0.25
C11orf88Q6PI97 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AC002056.1-201ENST00000395613 760 ntBASIC13.47□□□□□ -0.25
C11orf88Q6PI97 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms