Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 AL627231.1-201ENST00000394467 1125 ntBASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 RPSAP31-201ENST00000416648 895 ntBASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 AC078875.1-201ENST00000431907 724 ntBASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 RN7SL258P-201ENST00000478664 300 ntBASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 REXO1L4P-201ENST00000605109 1937 ntBASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 AC009090.5-201ENST00000624886 2285 ntBASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 RN7SL8P-201ENST00000461771 266 ntBASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 AC103810.10-201ENST00000606504 343 ntBASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 MIR6720-201ENST00000611664 98 ntBASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 KRT8P21-201ENST00000430398 1491 ntBASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 AC012508.2-201ENST00000567613 1472 ntBASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.22■□□□□ 0.19
CNKSR3Q6P9H4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNKSR3Q6P9H4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms