Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.4□□□□□ -0.26
FAM27BQ5VT28 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FAM27BQ5VT28 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
FAM27BQ5VT28 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 HLA-K-203ENST00000430151 1046 ntBASIC13.39□□□□□ -0.27
FAM27BQ5VT28 AC114812.1-204ENST00000449669 728 ntBASIC13.39□□□□□ -0.27
FAM27BQ5VT28 ELK1P1-201ENST00000485699 580 ntBASIC13.39□□□□□ -0.27
FAM27BQ5VT28 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 AC008494.3-201ENST00000606615 944 ntBASIC13.39□□□□□ -0.27
FAM27BQ5VT28 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 CICP23-201ENST00000605013 2741 ntBASIC13.39□□□□□ -0.27
FAM27BQ5VT28 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FAM27BQ5VT28 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 REXO1L5P-201ENST00000622260 2098 ntBASIC13.38□□□□□ -0.27
FAM27BQ5VT28 AL157414.3-201ENST00000624276 1954 ntBASIC13.38□□□□□ -0.27
FAM27BQ5VT28 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 ACKR1-201ENST00000368121 1240 ntBASIC13.38□□□□□ -0.27
FAM27BQ5VT28 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 AL139094.1-201ENST00000405549 1188 ntBASIC13.38□□□□□ -0.27
FAM27BQ5VT28 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 AP001582.1-201ENST00000525856 295 ntBASIC13.38□□□□□ -0.27
FAM27BQ5VT28 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 AC190387.1-201ENST00000551683 408 ntBASIC13.38□□□□□ -0.27
FAM27BQ5VT28 AC023824.1-201ENST00000562945 2975 ntBASIC13.38□□□□□ -0.27
FAM27BQ5VT28 TP53TG3HP-202ENST00000569755 579 ntBASIC13.38□□□□□ -0.27
FAM27BQ5VT28 SPDYE22P-201ENST00000582158 798 ntBASIC13.38□□□□□ -0.27
FAM27BQ5VT28 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27BQ5VT28 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms