Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 AGAP7P-201ENST00000582299 2062 ntBASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 AGAP14-201ENST00000624701 2060 ntBASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 PCDHA3-202ENST00000532566 4594 ntBASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC4Q5GLZ8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 BOLA2P3-201ENST00000404566 256 ntBASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 GHSR-202ENST00000427970 912 ntBASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 BNIP3P42-201ENST00000454982 569 ntBASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 BNIP3P29-201ENST00000598302 571 ntBASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 AC011447.5-201ENST00000616168 564 ntBASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 AL645728.2-202ENST00000641679 227 ntBASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 MROH4P-201ENST00000431302 1578 ntBASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC4Q5GLZ8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 TNRC18P2-201ENST00000417666 2714 ntBASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 AC092506.1-202ENST00000401022 528 ntBASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 TMEM14DP-201ENST00000422205 345 ntBASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 AC007389.4-201ENST00000454674 793 ntBASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 AL161772.1-201ENST00000610494 4412 ntBASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HERC4Q5GLZ8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HERC4Q5GLZ8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC4Q5GLZ8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC4Q5GLZ8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC4Q5GLZ8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms