Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 MIR940-201ENST00000401276 94 ntBASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 RNA5SP410-201ENST00000516285 106 ntBASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AC105233.2-201ENST00000523697 349 ntBASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 SLC25A1P1-201ENST00000528351 927 ntBASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AF228730.5-201ENST00000530288 346 ntBASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AC040169.1-201ENST00000565382 521 ntBASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AC138969.3-201ENST00000546612 1459 ntBASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AC138932.2-201ENST00000548268 1459 ntBASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AC126755.4-201ENST00000549796 1459 ntBASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
ANKRD55Q3KP44 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ANKRD55Q3KP44 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 AL139010.1-201ENST00000454878 894 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms