Protein–RNA interactions for Protein: Q04721

NOTCH2, Neurogenic locus notch homolog protein 2, humanhuman

Predictions only

Length 2,471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2Q04721 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
NOTCH2Q04721 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NOTCH2Q04721 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NOTCH2Q04721 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.75□□□□□ -0.37
NOTCH2Q04721 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.75□□□□□ -0.37
NOTCH2Q04721 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
NOTCH2Q04721 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
NOTCH2Q04721 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
NOTCH2Q04721 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NOTCH2Q04721 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NOTCH2Q04721 LINC01144-201ENST00000626198 1710 ntBASIC12.75□□□□□ -0.37
NOTCH2Q04721 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
NOTCH2Q04721 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NOTCH2Q04721 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NOTCH2Q04721 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NOTCH2Q04721 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NOTCH2Q04721 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
NOTCH2Q04721 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NOTCH2Q04721 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 RN7SL121P-201ENST00000584223 273 ntBASIC12.74□□□□□ -0.37
NOTCH2Q04721 AL450472.2-201ENST00000603663 1156 ntBASIC12.74□□□□□ -0.37
NOTCH2Q04721 AC090510.3-201ENST00000615831 821 ntBASIC12.74□□□□□ -0.37
NOTCH2Q04721 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 FKBP4P6-201ENST00000457486 1332 ntBASIC12.74□□□□□ -0.37
NOTCH2Q04721 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 AC106047.2-201ENST00000511723 743 ntBASIC12.74□□□□□ -0.37
NOTCH2Q04721 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 AL590235.1-201ENST00000564650 861 ntBASIC12.74□□□□□ -0.37
NOTCH2Q04721 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 GGT3P-204ENST00000453783 1664 ntBASIC12.74□□□□□ -0.37
NOTCH2Q04721 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NOTCH2Q04721 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.74□□□□□ -0.37
NOTCH2Q04721 CTBP2P8-201ENST00000422584 1330 ntBASIC12.73□□□□□ -0.37
NOTCH2Q04721 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NOTCH2Q04721 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NOTCH2Q04721 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC12.73□□□□□ -0.37
NOTCH2Q04721 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.73□□□□□ -0.37
NOTCH2Q04721 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NOTCH2Q04721 RN7SL494P-201ENST00000461517 304 ntBASIC12.73□□□□□ -0.37
NOTCH2Q04721 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.73□□□□□ -0.37
NOTCH2Q04721 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.73□□□□□ -0.37
NOTCH2Q04721 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.73□□□□□ -0.37
NOTCH2Q04721 AC005052.1-201ENST00000625181 2492 ntBASIC12.73□□□□□ -0.37
NOTCH2Q04721 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NOTCH2Q04721 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NOTCH2Q04721 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
NOTCH2Q04721 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.73□□□□□ -0.37
NOTCH2Q04721 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NOTCH2Q04721 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NOTCH2Q04721 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.73□□□□□ -0.37
NOTCH2Q04721 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NOTCH2Q04721 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.73□□□□□ -0.37
NOTCH2Q04721 INE2-201ENST00000630399 1874 ntBASIC12.73□□□□□ -0.37
NOTCH2Q04721 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms