Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 AC093813.1-201ENST00000605066 256 ntBASIC14.5□□□□□ -0.09
RAE1P78406 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.5□□□□□ -0.09
RAE1P78406 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.5□□□□□ -0.09
RAE1P78406 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAE1P78406 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.49□□□□□ -0.09
RAE1P78406 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.49□□□□□ -0.09
RAE1P78406 NORAD-201ENST00000565493 5339 ntBASIC14.49□□□□□ -0.09
RAE1P78406 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.49□□□□□ -0.09
RAE1P78406 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAE1P78406 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 AC005089.1-201ENST00000619486 2241 ntBASIC14.49□□□□□ -0.09
RAE1P78406 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 AL645937.2-201ENST00000396808 931 ntBASIC14.49□□□□□ -0.09
RAE1P78406 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 AC098850.1-201ENST00000419919 790 ntBASIC14.49□□□□□ -0.09
RAE1P78406 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.49□□□□□ -0.09
RAE1P78406 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.49□□□□□ -0.09
RAE1P78406 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 AC055876.2-201ENST00000531834 546 ntBASIC14.49□□□□□ -0.09
RAE1P78406 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.49□□□□□ -0.09
RAE1P78406 AC120045.2-201ENST00000567334 178 ntBASIC14.49□□□□□ -0.09
RAE1P78406 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.49□□□□□ -0.09
RAE1P78406 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.49□□□□□ -0.09
RAE1P78406 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.49□□□□□ -0.09
RAE1P78406 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.49□□□□□ -0.09
RAE1P78406 AC023090.2-201ENST00000625182 2110 ntBASIC14.49□□□□□ -0.09
RAE1P78406 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.49□□□□□ -0.09
RAE1P78406 PRSS30P-206ENST00000641773 873 ntBASIC14.49□□□□□ -0.09
RAE1P78406 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.49□□□□□ -0.09
RAE1P78406 INTS4P2-202ENST00000614726 2019 ntBASIC14.49□□□□□ -0.09
RAE1P78406 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAE1P78406 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RAE1P78406 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAE1P78406 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RAE1P78406 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
RAE1P78406 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 MIR661-201ENST00000384842 89 ntBASIC14.48□□□□□ -0.09
RAE1P78406 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.48□□□□□ -0.09
RAE1P78406 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.48□□□□□ -0.09
RAE1P78406 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 RPL13AP25-201ENST00000484130 612 ntBASIC14.48□□□□□ -0.09
RAE1P78406 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.48□□□□□ -0.09
RAE1P78406 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.48□□□□□ -0.09
RAE1P78406 AC124283.3-201ENST00000570869 594 ntBASIC14.48□□□□□ -0.09
RAE1P78406 AC027796.2-201ENST00000575326 344 ntBASIC14.48□□□□□ -0.09
RAE1P78406 SPDYE22P-201ENST00000582158 798 ntBASIC14.48□□□□□ -0.09
RAE1P78406 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.48□□□□□ -0.09
RAE1P78406 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.48□□□□□ -0.09
RAE1P78406 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms