Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.21□□□□□ -0.29
AP3S2P59780 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.21□□□□□ -0.29
AP3S2P59780 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.21□□□□□ -0.29
AP3S2P59780 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
AP3S2P59780 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.21□□□□□ -0.3
AP3S2P59780 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
AP3S2P59780 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
AP3S2P59780 AC012508.2-201ENST00000567613 1472 ntBASIC13.21□□□□□ -0.3
AP3S2P59780 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
AP3S2P59780 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.21□□□□□ -0.3
AP3S2P59780 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
AP3S2P59780 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
AP3S2P59780 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
AP3S2P59780 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
AP3S2P59780 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.21□□□□□ -0.3
AP3S2P59780 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.21□□□□□ -0.3
AP3S2P59780 AC023090.2-201ENST00000625182 2110 ntBASIC13.21□□□□□ -0.3
AP3S2P59780 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
AP3S2P59780 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.21□□□□□ -0.3
AP3S2P59780 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.2□□□□□ -0.3
AP3S2P59780 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
AP3S2P59780 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
AP3S2P59780 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
AP3S2P59780 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
AP3S2P59780 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
AP3S2P59780 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 AC092474.2-201ENST00000424288 719 ntBASIC13.2□□□□□ -0.3
AP3S2P59780 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.2□□□□□ -0.3
AP3S2P59780 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.2□□□□□ -0.3
AP3S2P59780 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.2□□□□□ -0.3
AP3S2P59780 AC061975.2-201ENST00000581722 295 ntBASIC13.2□□□□□ -0.3
AP3S2P59780 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
AP3S2P59780 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.2□□□□□ -0.3
AP3S2P59780 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.2□□□□□ -0.3
AP3S2P59780 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
AP3S2P59780 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 PCDHA5-203ENST00000614258 4248 ntBASIC13.2□□□□□ -0.3
AP3S2P59780 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP3S2P59780 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.19□□□□□ -0.3
AP3S2P59780 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
AP3S2P59780 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.19□□□□□ -0.3
AP3S2P59780 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
AP3S2P59780 AC092053.3-201ENST00000641308 4975 ntBASIC13.19□□□□□ -0.3
AP3S2P59780 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
AP3S2P59780 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
AP3S2P59780 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
AP3S2P59780 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
AP3S2P59780 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S2P59780 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.19□□□□□ -0.3
AP3S2P59780 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.19□□□□□ -0.3
AP3S2P59780 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
AP3S2P59780 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms