Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.98■□□□□ 0.79
RIPK4P57078 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.98■□□□□ 0.79
RIPK4P57078 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 CNN2P8-201ENST00000421872 913 ntBASIC19.98■□□□□ 0.79
RIPK4P57078 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.98■□□□□ 0.79
RIPK4P57078 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.98■□□□□ 0.79
RIPK4P57078 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RIPK4P57078 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.98■□□□□ 0.79
RIPK4P57078 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.98■□□□□ 0.79
RIPK4P57078 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.98■□□□□ 0.79
RIPK4P57078 MIR6805-201ENST00000615055 62 ntBASIC19.98■□□□□ 0.79
RIPK4P57078 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.98■□□□□ 0.79
RIPK4P57078 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.98■□□□□ 0.79
RIPK4P57078 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.98■□□□□ 0.79
RIPK4P57078 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.98■□□□□ 0.79
RIPK4P57078 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.98■□□□□ 0.79
RIPK4P57078 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.97■□□□□ 0.79
RIPK4P57078 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RIPK4P57078 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 FAM197Y7-201ENST00000432892 766 ntBASIC19.97■□□□□ 0.79
RIPK4P57078 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.97■□□□□ 0.79
RIPK4P57078 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.97■□□□□ 0.79
RIPK4P57078 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.97■□□□□ 0.79
RIPK4P57078 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 AC055811.4-201ENST00000624039 1754 ntBASIC19.97■□□□□ 0.79
RIPK4P57078 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RIPK4P57078 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.97■□□□□ 0.79
RIPK4P57078 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK4P57078 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.97■□□□□ 0.79
RIPK4P57078 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK4P57078 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RIPK4P57078 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RIPK4P57078 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
RIPK4P57078 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK4P57078 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK4P57078 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RIPK4P57078 AC104640.1-201ENST00000562617 2109 ntBASIC19.96■□□□□ 0.79
RIPK4P57078 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 AC144831.1-201ENST00000573312 2656 ntBASIC19.96■□□□□ 0.79
RIPK4P57078 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.96■□□□□ 0.79
RIPK4P57078 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
RIPK4P57078 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK4P57078 AC004466.1-201ENST00000599515 1080 ntBASIC19.96■□□□□ 0.79
RIPK4P57078 COX11-210ENST00000639671 696 ntBASIC19.96■□□□□ 0.79
RIPK4P57078 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK4P57078 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RIPK4P57078 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK4P57078 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RIPK4P57078 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK4P57078 LILRP1-201ENST00000444199 1370 ntBASIC19.95■□□□□ 0.79
RIPK4P57078 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RIPK4P57078 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RIPK4P57078 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.95■□□□□ 0.78
RIPK4P57078 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.95■□□□□ 0.78
RIPK4P57078 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms