Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HMGA2P52926 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGA2P52926 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.96□□□□□ -0.17
HMGA2P52926 AGGF1P1-201ENST00000509500 2073 ntBASIC13.96□□□□□ -0.17
HMGA2P52926 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGA2P52926 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.96□□□□□ -0.17
HMGA2P52926 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.96□□□□□ -0.17
HMGA2P52926 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.96□□□□□ -0.17
HMGA2P52926 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGA2P52926 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.96□□□□□ -0.17
HMGA2P52926 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HMGA2P52926 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.96□□□□□ -0.17
HMGA2P52926 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGA2P52926 AC004835.2-201ENST00000603762 682 ntBASIC13.96□□□□□ -0.17
HMGA2P52926 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGA2P52926 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HMGA2P52926 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HMGA2P52926 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HMGA2P52926 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HMGA2P52926 AC015656.1-201ENST00000624209 3578 ntBASIC13.96□□□□□ -0.17
HMGA2P52926 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HMGA2P52926 OR2I1P-210ENST00000642037 4691 ntBASIC13.96□□□□□ -0.17
HMGA2P52926 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMGA2P52926 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
HMGA2P52926 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.96□□□□□ -0.18
HMGA2P52926 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMGA2P52926 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HMGA2P52926 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
HMGA2P52926 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMGA2P52926 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
HMGA2P52926 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HMGA2P52926 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HMGA2P52926 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
HMGA2P52926 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.95□□□□□ -0.18
HMGA2P52926 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.95□□□□□ -0.18
HMGA2P52926 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.95□□□□□ -0.18
HMGA2P52926 HLA-V-204ENST00000476601 1289 ntBASIC13.95□□□□□ -0.18
HMGA2P52926 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.95□□□□□ -0.18
HMGA2P52926 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.95□□□□□ -0.18
HMGA2P52926 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.95□□□□□ -0.18
HMGA2P52926 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HMGA2P52926 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGA2P52926 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 AC011474.4-201ENST00000623523 2076 ntBASIC13.95□□□□□ -0.18
HMGA2P52926 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
HMGA2P52926 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGA2P52926 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HMGA2P52926 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGA2P52926 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGA2P52926 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms