Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBP50607 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBP50607 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TUBP50607 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 AL138799.1-201ENST00000448213 1675 ntBASIC16.16■□□□□ 0.18
TUBP50607 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TUBP50607 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TUBP50607 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TUBP50607 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TUBP50607 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.16■□□□□ 0.18
TUBP50607 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBP50607 AC022210.1-201ENST00000449856 793 ntBASIC16.16■□□□□ 0.18
TUBP50607 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.16■□□□□ 0.18
TUBP50607 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBP50607 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TUBP50607 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.16■□□□□ 0.18
TUBP50607 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBP50607 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TUBP50607 AL645728.2-202ENST00000641679 227 ntBASIC16.16■□□□□ 0.18
TUBP50607 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TUBP50607 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBP50607 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBP50607 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBP50607 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBP50607 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TUBP50607 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBP50607 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TUBP50607 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBP50607 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 AL355864.2-201ENST00000447420 863 ntBASIC16.15■□□□□ 0.18
TUBP50607 AC093433.1-201ENST00000458048 571 ntBASIC16.15■□□□□ 0.18
TUBP50607 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TUBP50607 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TUBP50607 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.15■□□□□ 0.18
TUBP50607 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 AC084364.1-201ENST00000551967 1556 ntBASIC16.15■□□□□ 0.18
TUBP50607 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.15■□□□□ 0.18
TUBP50607 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 AC020658.6-201ENST00000623564 1870 ntBASIC16.15■□□□□ 0.18
TUBP50607 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TUBP50607 PPT1-215ENST00000641471 2368 ntBASIC16.15■□□□□ 0.18
TUBP50607 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 AC090616.6-203ENST00000579186 1945 ntBASIC16.15■□□□□ 0.18
TUBP50607 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TUBP50607 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBP50607 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBP50607 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
TUBP50607 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBP50607 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms