Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SNCAP37840 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SNCAP37840 AC004987.2-201ENST00000395959 1148 ntBASIC12.69□□□□□ -0.38
SNCAP37840 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 FAM8A3P-201ENST00000427218 844 ntBASIC12.69□□□□□ -0.38
SNCAP37840 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 RPL13AP23-201ENST00000480739 586 ntBASIC12.69□□□□□ -0.38
SNCAP37840 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.69□□□□□ -0.38
SNCAP37840 KRT126P-201ENST00000549467 1181 ntBASIC12.69□□□□□ -0.38
SNCAP37840 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.69□□□□□ -0.38
SNCAP37840 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.69□□□□□ -0.38
SNCAP37840 AC034105.1-201ENST00000563488 319 ntBASIC12.69□□□□□ -0.38
SNCAP37840 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.69□□□□□ -0.38
SNCAP37840 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.69□□□□□ -0.38
SNCAP37840 SLC25A6P4-201ENST00000586535 553 ntBASIC12.69□□□□□ -0.38
SNCAP37840 AC073389.1-201ENST00000595595 795 ntBASIC12.69□□□□□ -0.38
SNCAP37840 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.69□□□□□ -0.38
SNCAP37840 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.69□□□□□ -0.38
SNCAP37840 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
SNCAP37840 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SNCAP37840 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SNCAP37840 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.69□□□□□ -0.38
SNCAP37840 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.69□□□□□ -0.38
SNCAP37840 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.69□□□□□ -0.38
SNCAP37840 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.69□□□□□ -0.38
SNCAP37840 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 INTS4P1-203ENST00000641008 3683 ntBASIC12.68□□□□□ -0.38
SNCAP37840 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SNCAP37840 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
SNCAP37840 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.68□□□□□ -0.38
SNCAP37840 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SNCAP37840 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.68□□□□□ -0.38
SNCAP37840 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.68□□□□□ -0.38
SNCAP37840 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.68□□□□□ -0.38
SNCAP37840 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.68□□□□□ -0.38
SNCAP37840 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.68□□□□□ -0.38
SNCAP37840 FAM86C2P-203ENST00000528684 1004 ntBASIC12.68□□□□□ -0.38
SNCAP37840 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.68□□□□□ -0.38
SNCAP37840 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 AP002472.1-201ENST00000577490 586 ntBASIC12.68□□□□□ -0.38
SNCAP37840 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.68□□□□□ -0.38
SNCAP37840 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.68□□□□□ -0.38
SNCAP37840 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
SNCAP37840 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SNCAP37840 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.68□□□□□ -0.38
SNCAP37840 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms