Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 MIR661-201ENST00000384842 89 ntBASIC16.18■□□□□ 0.18
RFC1P35251 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.18■□□□□ 0.18
RFC1P35251 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.18■□□□□ 0.18
RFC1P35251 TSPY16P-201ENST00000449843 468 ntBASIC16.18■□□□□ 0.18
RFC1P35251 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.18■□□□□ 0.18
RFC1P35251 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.18■□□□□ 0.18
RFC1P35251 AC036164.1-201ENST00000570544 333 ntBASIC16.18■□□□□ 0.18
RFC1P35251 MIR8072-201ENST00000614241 80 ntBASIC16.18■□□□□ 0.18
RFC1P35251 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RFC1P35251 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RFC1P35251 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFC1P35251 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFC1P35251 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFC1P35251 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.18■□□□□ 0.18
RFC1P35251 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RFC1P35251 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.17■□□□□ 0.18
RFC1P35251 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RFC1P35251 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 AJ011931.1-201ENST00000618749 2492 ntBASIC16.17■□□□□ 0.18
RFC1P35251 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RFC1P35251 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
RFC1P35251 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 MEP1AP4-201ENST00000423244 1087 ntBASIC16.17■□□□□ 0.18
RFC1P35251 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC1P35251 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.17■□□□□ 0.18
RFC1P35251 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.17■□□□□ 0.18
RFC1P35251 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC1P35251 AC009118.2-201ENST00000613275 655 ntBASIC16.17■□□□□ 0.18
RFC1P35251 AL662799.1-202ENST00000614205 422 ntBASIC16.17■□□□□ 0.18
RFC1P35251 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC1P35251 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC1P35251 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.17■□□□□ 0.18
RFC1P35251 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RFC1P35251 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 DRD5P1-201ENST00000456605 1438 ntBASIC16.17■□□□□ 0.18
RFC1P35251 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RFC1P35251 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
RFC1P35251 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFC1P35251 ACE3P-201ENST00000423435 1973 ntBASIC16.17■□□□□ 0.18
RFC1P35251 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 AC012508.2-201ENST00000567613 1472 ntBASIC16.16■□□□□ 0.18
RFC1P35251 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
RFC1P35251 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC1P35251 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC1P35251 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC1P35251 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFC1P35251 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.16■□□□□ 0.18
RFC1P35251 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.16■□□□□ 0.18
RFC1P35251 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.16■□□□□ 0.18
RFC1P35251 BCRP1-201ENST00000444246 691 ntBASIC16.16■□□□□ 0.18
RFC1P35251 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC1P35251 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.16■□□□□ 0.18
RFC1P35251 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC1P35251 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.16■□□□□ 0.18
RFC1P35251 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.16■□□□□ 0.18
RFC1P35251 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms