Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.26■□□□□ 0.83
USP6P35125 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
USP6P35125 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.26■□□□□ 0.83
USP6P35125 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.26■□□□□ 0.83
USP6P35125 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 SALL4P5-201ENST00000419001 1760 ntBASIC20.26■□□□□ 0.83
USP6P35125 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 AC239868.1-201ENST00000369385 493 ntBASIC20.26■□□□□ 0.83
USP6P35125 RPL17P11-201ENST00000417593 544 ntBASIC20.26■□□□□ 0.83
USP6P35125 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20.26■□□□□ 0.83
USP6P35125 AC008267.1-201ENST00000474858 1069 ntBASIC20.26■□□□□ 0.83
USP6P35125 LY6E-208ENST00000520531 490 ntTSL 2 BASIC20.26■□□□□ 0.83
USP6P35125 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC20.26■□□□□ 0.83
USP6P35125 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USP6P35125 STUB1-204ENST00000564370 875 ntTSL 2 BASIC20.26■□□□□ 0.83
USP6P35125 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC20.26■□□□□ 0.83
USP6P35125 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.26■□□□□ 0.83
USP6P35125 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC20.26■□□□□ 0.83
USP6P35125 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
USP6P35125 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP6P35125 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.25■□□□□ 0.83
USP6P35125 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP6P35125 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.25■□□□□ 0.83
USP6P35125 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
USP6P35125 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.25■□□□□ 0.83
USP6P35125 DOC2GP-204ENST00000639052 2548 ntBASIC20.25■□□□□ 0.83
USP6P35125 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.25■□□□□ 0.83
USP6P35125 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 KRT18P36-201ENST00000411618 1276 ntBASIC20.25■□□□□ 0.83
USP6P35125 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.25■□□□□ 0.83
USP6P35125 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.25■□□□□ 0.83
USP6P35125 RN7SL181P-201ENST00000462921 277 ntBASIC20.25■□□□□ 0.83
USP6P35125 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
USP6P35125 AP003419.4-201ENST00000616071 517 ntBASIC20.25■□□□□ 0.83
USP6P35125 YRDCP1-201ENST00000621419 643 ntBASIC20.25■□□□□ 0.83
USP6P35125 AL353726.2-201ENST00000623259 884 ntBASIC20.25■□□□□ 0.83
USP6P35125 AC007292.2-201ENST00000593524 1812 ntBASIC20.25■□□□□ 0.83
USP6P35125 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP6P35125 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.25■□□□□ 0.83
USP6P35125 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
USP6P35125 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP6P35125 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.24■□□□□ 0.83
USP6P35125 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.24■□□□□ 0.83
USP6P35125 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
USP6P35125 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.24■□□□□ 0.83
USP6P35125 IQSEC3P1-201ENST00000538799 536 ntBASIC20.24■□□□□ 0.83
USP6P35125 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.24■□□□□ 0.83
USP6P35125 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.24■□□□□ 0.83
USP6P35125 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20.24■□□□□ 0.83
USP6P35125 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP6P35125 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
USP6P35125 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
USP6P35125 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC20.23■□□□□ 0.83
USP6P35125 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
USP6P35125 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms