Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CNGA1P29973 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CNGA1P29973 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.4■□□□□ 0.38
CNGA1P29973 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.4■□□□□ 0.38
CNGA1P29973 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.4■□□□□ 0.38
CNGA1P29973 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 AC007950.2-201ENST00000615045 2347 ntBASIC17.4■□□□□ 0.38
CNGA1P29973 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.4■□□□□ 0.38
CNGA1P29973 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.4■□□□□ 0.38
CNGA1P29973 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.4■□□□□ 0.38
CNGA1P29973 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.4■□□□□ 0.38
CNGA1P29973 MPRIPP1-201ENST00000452433 1089 ntBASIC17.4■□□□□ 0.38
CNGA1P29973 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.4■□□□□ 0.38
CNGA1P29973 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.4■□□□□ 0.38
CNGA1P29973 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 RN7SL48P-201ENST00000579283 293 ntBASIC17.4■□□□□ 0.38
CNGA1P29973 MIR4313-201ENST00000580760 101 ntBASIC17.4■□□□□ 0.38
CNGA1P29973 AC007663.3-201ENST00000609632 465 ntBASIC17.4■□□□□ 0.38
CNGA1P29973 AC138627.1-207ENST00000641560 1006 ntBASIC17.4■□□□□ 0.38
CNGA1P29973 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.4■□□□□ 0.38
CNGA1P29973 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.4■□□□□ 0.38
CNGA1P29973 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CNGA1P29973 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CNGA1P29973 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNGA1P29973 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNGA1P29973 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNGA1P29973 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CNGA1P29973 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CNGA1P29973 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.39■□□□□ 0.38
CNGA1P29973 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.39■□□□□ 0.38
CNGA1P29973 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.39■□□□□ 0.38
CNGA1P29973 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.39■□□□□ 0.37
CNGA1P29973 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNGA1P29973 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.39■□□□□ 0.37
CNGA1P29973 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CNGA1P29973 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.39■□□□□ 0.37
CNGA1P29973 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.39■□□□□ 0.37
CNGA1P29973 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 AC148477.4-201ENST00000613430 1793 ntBASIC17.39■□□□□ 0.37
CNGA1P29973 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNGA1P29973 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.39■□□□□ 0.37
CNGA1P29973 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.39■□□□□ 0.37
CNGA1P29973 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.39■□□□□ 0.37
CNGA1P29973 FXNP2-201ENST00000411625 547 ntBASIC17.39■□□□□ 0.37
CNGA1P29973 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.39■□□□□ 0.37
CNGA1P29973 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CNGA1P29973 HSPB1P2-201ENST00000448722 546 ntBASIC17.39■□□□□ 0.37
CNGA1P29973 RN7SL769P-201ENST00000469386 295 ntBASIC17.39■□□□□ 0.37
CNGA1P29973 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNGA1P29973 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.39■□□□□ 0.37
CNGA1P29973 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.39■□□□□ 0.37
CNGA1P29973 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.39■□□□□ 0.37
CNGA1P29973 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.39■□□□□ 0.37
CNGA1P29973 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.39■□□□□ 0.37
CNGA1P29973 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.39■□□□□ 0.37
CNGA1P29973 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.39■□□□□ 0.37
CNGA1P29973 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
CNGA1P29973 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CNGA1P29973 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNGA1P29973 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CNGA1P29973 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNGA1P29973 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNGA1P29973 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.38■□□□□ 0.37
CNGA1P29973 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNGA1P29973 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CNGA1P29973 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CNGA1P29973 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.38■□□□□ 0.37
CNGA1P29973 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNGA1P29973 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNGA1P29973 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNGA1P29973 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNGA1P29973 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms