Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 Z97205.2-201ENST00000564697 1639 ntBASIC15.17■□□□□ 0.02
VARSP26640 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 AC087499.5-201ENST00000452760 1342 ntBASIC15.17■□□□□ 0.02
VARSP26640 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VARSP26640 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VARSP26640 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.16■□□□□ 0.02
VARSP26640 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
VARSP26640 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.16■□□□□ 0.02
VARSP26640 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.16■□□□□ 0.02
VARSP26640 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
VARSP26640 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.16■□□□□ 0.02
VARSP26640 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.16■□□□□ 0.02
VARSP26640 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 AC098614.1-201ENST00000368528 745 ntBASIC15.16■□□□□ 0.02
VARSP26640 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
VARSP26640 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.16■□□□□ 0.02
VARSP26640 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VARSP26640 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.16■□□□□ 0.02
VARSP26640 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VARSP26640 AC044860.1-202ENST00000559481 777 ntBASIC15.16■□□□□ 0.02
VARSP26640 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.16■□□□□ 0.02
VARSP26640 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
VARSP26640 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.16■□□□□ 0.02
VARSP26640 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 LINC01115-203ENST00000606068 577 ntBASIC15.16■□□□□ 0.02
VARSP26640 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
VARSP26640 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
VARSP26640 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VARSP26640 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VARSP26640 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARSP26640 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.15■□□□□ 0.02
VARSP26640 COX5BP8-201ENST00000416911 349 ntBASIC15.15■□□□□ 0.02
VARSP26640 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.15■□□□□ 0.02
VARSP26640 TSSK5P-201ENST00000423978 907 ntBASIC15.15■□□□□ 0.02
VARSP26640 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.15■□□□□ 0.02
VARSP26640 HLA-V-201ENST00000429037 534 ntBASIC15.15■□□□□ 0.02
VARSP26640 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.15■□□□□ 0.02
VARSP26640 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.15■□□□□ 0.02
VARSP26640 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.15■□□□□ 0.02
VARSP26640 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.15■□□□□ 0.02
VARSP26640 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.15■□□□□ 0.02
VARSP26640 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms