Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LMO1P25800 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.88□□□□□ -0.35
LMO1P25800 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.88□□□□□ -0.35
LMO1P25800 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.88□□□□□ -0.35
LMO1P25800 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 CLK3P2-201ENST00000427566 1453 ntBASIC12.88□□□□□ -0.35
LMO1P25800 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 AC015656.1-201ENST00000624209 3578 ntBASIC12.88□□□□□ -0.35
LMO1P25800 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LMO1P25800 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LMO1P25800 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
LMO1P25800 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.87□□□□□ -0.35
LMO1P25800 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
LMO1P25800 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LMO1P25800 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.87□□□□□ -0.35
LMO1P25800 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.87□□□□□ -0.35
LMO1P25800 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LMO1P25800 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.87□□□□□ -0.35
LMO1P25800 AL589987.1-201ENST00000453380 819 ntBASIC12.87□□□□□ -0.35
LMO1P25800 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.87□□□□□ -0.35
LMO1P25800 SPDYE18-201ENST00000510091 1050 ntBASIC12.87□□□□□ -0.35
LMO1P25800 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.87□□□□□ -0.35
LMO1P25800 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.87□□□□□ -0.35
LMO1P25800 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LMO1P25800 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.87□□□□□ -0.35
LMO1P25800 RRP7BP-205ENST00000566851 833 ntBASIC12.87□□□□□ -0.35
LMO1P25800 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.87□□□□□ -0.35
LMO1P25800 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.87□□□□□ -0.35
LMO1P25800 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LMO1P25800 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LMO1P25800 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.87□□□□□ -0.35
LMO1P25800 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.87□□□□□ -0.35
LMO1P25800 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LMO1P25800 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO1P25800 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms