Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFSF4P23510 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.15□□□□□ -0.3
TNFSF4P23510 AC026410.3-201ENST00000514280 936 ntBASIC13.15□□□□□ -0.3
TNFSF4P23510 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.15□□□□□ -0.3
TNFSF4P23510 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.15□□□□□ -0.3
TNFSF4P23510 AL596325.1-201ENST00000563991 1082 ntBASIC13.15□□□□□ -0.3
TNFSF4P23510 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.15□□□□□ -0.3
TNFSF4P23510 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.15□□□□□ -0.3
TNFSF4P23510 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 AC107373.2-201ENST00000607735 490 ntBASIC13.15□□□□□ -0.3
TNFSF4P23510 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.3
TNFSF4P23510 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 CU634019.7-201ENST00000624153 1185 ntBASIC13.15□□□□□ -0.3
TNFSF4P23510 FP236241.2-201ENST00000624906 1185 ntBASIC13.15□□□□□ -0.3
TNFSF4P23510 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TNFSF4P23510 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFSF4P23510 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TNFSF4P23510 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFSF4P23510 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
TNFSF4P23510 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
TNFSF4P23510 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TNFSF4P23510 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TNFSF4P23510 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
TNFSF4P23510 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.14□□□□□ -0.31
TNFSF4P23510 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TNFSF4P23510 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 AC098850.1-201ENST00000419919 790 ntBASIC13.14□□□□□ -0.31
TNFSF4P23510 NUS1P3-201ENST00000423502 862 ntBASIC13.14□□□□□ -0.31
TNFSF4P23510 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TNFSF4P23510 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.14□□□□□ -0.31
TNFSF4P23510 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.14□□□□□ -0.31
TNFSF4P23510 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.14□□□□□ -0.31
TNFSF4P23510 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.14□□□□□ -0.31
TNFSF4P23510 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.14□□□□□ -0.31
TNFSF4P23510 AC005225.4-201ENST00000557330 545 ntBASIC13.14□□□□□ -0.31
TNFSF4P23510 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 WASH4P-201ENST00000564273 1246 ntBASIC13.14□□□□□ -0.31
TNFSF4P23510 CTBP2P3-201ENST00000585629 1255 ntBASIC13.14□□□□□ -0.31
TNFSF4P23510 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.14□□□□□ -0.31
TNFSF4P23510 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TNFSF4P23510 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.14□□□□□ -0.31
TNFSF4P23510 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TNFSF4P23510 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFSF4P23510 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TNFSF4P23510 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFSF4P23510 DRD5P1-201ENST00000456605 1438 ntBASIC13.13□□□□□ -0.31
TNFSF4P23510 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TNFSF4P23510 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms