Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.45■□□□□ 0.22
CD58P19256 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CD58P19256 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.45■□□□□ 0.22
CD58P19256 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.45■□□□□ 0.22
CD58P19256 AC093813.1-201ENST00000605066 256 ntBASIC16.45■□□□□ 0.22
CD58P19256 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CD58P19256 CU634019.7-201ENST00000624153 1185 ntBASIC16.45■□□□□ 0.22
CD58P19256 FP236241.2-201ENST00000624906 1185 ntBASIC16.45■□□□□ 0.22
CD58P19256 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.45■□□□□ 0.22
CD58P19256 AL033527.5-201ENST00000641382 801 ntBASIC16.45■□□□□ 0.22
CD58P19256 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CD58P19256 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD58P19256 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD58P19256 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.45■□□□□ 0.22
CD58P19256 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.45■□□□□ 0.22
CD58P19256 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.45■□□□□ 0.22
CD58P19256 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CD58P19256 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.45■□□□□ 0.22
CD58P19256 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.45■□□□□ 0.22
CD58P19256 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.45■□□□□ 0.22
CD58P19256 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD58P19256 AP000845.1-201ENST00000581677 2131 ntBASIC16.45■□□□□ 0.22
CD58P19256 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.45■□□□□ 0.22
CD58P19256 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CD58P19256 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 KRT8P22-201ENST00000562317 1415 ntBASIC16.45■□□□□ 0.22
CD58P19256 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.45■□□□□ 0.22
CD58P19256 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD58P19256 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.44■□□□□ 0.22
CD58P19256 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.44■□□□□ 0.22
CD58P19256 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.44■□□□□ 0.22
CD58P19256 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CD58P19256 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.44■□□□□ 0.22
CD58P19256 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 COX20P2-201ENST00000452636 358 ntBASIC16.44■□□□□ 0.22
CD58P19256 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CD58P19256 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.44■□□□□ 0.22
CD58P19256 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.44■□□□□ 0.22
CD58P19256 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.44■□□□□ 0.22
CD58P19256 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.44■□□□□ 0.22
CD58P19256 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CD58P19256 AL645728.2-202ENST00000641679 227 ntBASIC16.44■□□□□ 0.22
CD58P19256 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.44■□□□□ 0.22
CD58P19256 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD58P19256 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD58P19256 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD58P19256 AC007787.1-201ENST00000588095 1583 ntBASIC16.43■□□□□ 0.22
CD58P19256 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CD58P19256 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.43■□□□□ 0.22
CD58P19256 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.43■□□□□ 0.22
CD58P19256 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CD58P19256 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.43■□□□□ 0.22
CD58P19256 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD58P19256 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD58P19256 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CD58P19256 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CD58P19256 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.43■□□□□ 0.22
CD58P19256 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CD58P19256 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD58P19256 RN7SL752P-201ENST00000463779 287 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms