Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN1P18031 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
PTPN1P18031 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PTPN1P18031 AC022616.1-201ENST00000518688 554 ntBASIC16.19■□□□□ 0.18
PTPN1P18031 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN1P18031 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN1P18031 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN1P18031 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PTPN1P18031 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN1P18031 AL359881.2-201ENST00000602973 570 ntBASIC16.19■□□□□ 0.18
PTPN1P18031 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 AC132938.4-201ENST00000623835 848 ntBASIC16.19■□□□□ 0.18
PTPN1P18031 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN1P18031 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PTPN1P18031 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 EIF3FP3-201ENST00000434851 1086 ntBASIC16.18■□□□□ 0.18
PTPN1P18031 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 RPL7P3-201ENST00000441388 714 ntBASIC16.18■□□□□ 0.18
PTPN1P18031 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 AC119751.2-201ENST00000504529 210 ntBASIC16.18■□□□□ 0.18
PTPN1P18031 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN1P18031 AP000812.2-201ENST00000538934 718 ntBASIC16.18■□□□□ 0.18
PTPN1P18031 MIR4259-201ENST00000584466 101 ntBASIC16.18■□□□□ 0.18
PTPN1P18031 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 AC013268.4-201ENST00000637413 2228 ntBASIC16.18■□□□□ 0.18
PTPN1P18031 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN1P18031 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN1P18031 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN1P18031 MROH4P-201ENST00000431302 1578 ntBASIC16.17■□□□□ 0.18
PTPN1P18031 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN1P18031 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
PTPN1P18031 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN1P18031 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN1P18031 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN1P18031 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PTPN1P18031 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN1P18031 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN1P18031 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN1P18031 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN1P18031 AC068587.6-202ENST00000641839 5619 ntBASIC16.17■□□□□ 0.18
PTPN1P18031 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN1P18031 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN1P18031 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN1P18031 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms