Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC6P09630 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HOXC6P09630 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.11■□□□□ 0.33
HOXC6P09630 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 SHC1P1-201ENST00000425230 1745 ntBASIC17.1■□□□□ 0.33
HOXC6P09630 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HOXC6P09630 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HOXC6P09630 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC6P09630 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 RPL17P11-201ENST00000417593 544 ntBASIC17.1■□□□□ 0.33
HOXC6P09630 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.1■□□□□ 0.33
HOXC6P09630 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.1■□□□□ 0.33
HOXC6P09630 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.1■□□□□ 0.33
HOXC6P09630 AC103988.2-201ENST00000561804 725 ntBASIC17.1■□□□□ 0.33
HOXC6P09630 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC6P09630 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 AC020922.3-201ENST00000595064 547 ntBASIC17.1■□□□□ 0.33
HOXC6P09630 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.1■□□□□ 0.33
HOXC6P09630 AC138696.2-201ENST00000607376 223 ntBASIC17.1■□□□□ 0.33
HOXC6P09630 MIR7845-201ENST00000618396 99 ntBASIC17.1■□□□□ 0.33
HOXC6P09630 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HOXC6P09630 AC006480.2-201ENST00000609770 1337 ntBASIC17.1■□□□□ 0.33
HOXC6P09630 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HOXC6P09630 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC6P09630 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HOXC6P09630 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOXC6P09630 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC6P09630 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HOXC6P09630 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HOXC6P09630 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC6P09630 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC6P09630 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HOXC6P09630 AP003680.1-201ENST00000598970 3660 ntBASIC17.09■□□□□ 0.33
HOXC6P09630 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
HOXC6P09630 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC6P09630 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC6P09630 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HOXC6P09630 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HOXC6P09630 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXC6P09630 AC008267.1-201ENST00000474858 1069 ntBASIC17.09■□□□□ 0.33
HOXC6P09630 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC6P09630 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 AL160314.3-201ENST00000556041 767 ntBASIC17.09■□□□□ 0.33
HOXC6P09630 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC6P09630 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC6P09630 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms