Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.09■□□□□ 0.33
CYP3A4P08684 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.09■□□□□ 0.33
CYP3A4P08684 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.09■□□□□ 0.33
CYP3A4P08684 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CYP3A4P08684 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP3A4P08684 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.09■□□□□ 0.33
CYP3A4P08684 AP000593.2-201ENST00000542775 1433 ntBASIC17.09■□□□□ 0.33
CYP3A4P08684 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.09■□□□□ 0.33
CYP3A4P08684 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYP3A4P08684 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CYP3A4P08684 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CYP3A4P08684 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CYP3A4P08684 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CYP3A4P08684 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CYP3A4P08684 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CYP3A4P08684 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CYP3A4P08684 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CYP3A4P08684 AL391280.1-201ENST00000506969 1062 ntBASIC17.08■□□□□ 0.32
CYP3A4P08684 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.08■□□□□ 0.32
CYP3A4P08684 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.08■□□□□ 0.32
CYP3A4P08684 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.08■□□□□ 0.32
CYP3A4P08684 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CYP3A4P08684 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CYP3A4P08684 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.08■□□□□ 0.32
CYP3A4P08684 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.07■□□□□ 0.32
CYP3A4P08684 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
CYP3A4P08684 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.07■□□□□ 0.32
CYP3A4P08684 AL354989.2-201ENST00000435838 1540 ntBASIC17.07■□□□□ 0.32
CYP3A4P08684 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.07■□□□□ 0.32
CYP3A4P08684 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.07■□□□□ 0.32
CYP3A4P08684 AL138725.1-201ENST00000407347 1314 ntBASIC17.07■□□□□ 0.32
CYP3A4P08684 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 RN7SKP230-201ENST00000365642 335 ntBASIC17.07■□□□□ 0.32
CYP3A4P08684 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 FAM21FP-201ENST00000426241 1131 ntBASIC17.07■□□□□ 0.32
CYP3A4P08684 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.07■□□□□ 0.32
CYP3A4P08684 YBX1P6-201ENST00000442962 1002 ntBASIC17.07■□□□□ 0.32
CYP3A4P08684 CNN2P10-201ENST00000443067 918 ntBASIC17.07■□□□□ 0.32
CYP3A4P08684 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.07■□□□□ 0.32
CYP3A4P08684 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.07■□□□□ 0.32
CYP3A4P08684 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.07■□□□□ 0.32
CYP3A4P08684 RN7SL713P-201ENST00000582127 302 ntBASIC17.07■□□□□ 0.32
CYP3A4P08684 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.07■□□□□ 0.32
CYP3A4P08684 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.07■□□□□ 0.32
CYP3A4P08684 AC138696.2-201ENST00000607376 223 ntBASIC17.07■□□□□ 0.32
CYP3A4P08684 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CYP3A4P08684 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.07■□□□□ 0.32
CYP3A4P08684 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CYP3A4P08684 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CYP3A4P08684 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CYP3A4P08684 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.07■□□□□ 0.32
CYP3A4P08684 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.07■□□□□ 0.32
CYP3A4P08684 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms